PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC003711.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 215aa    MW: 24065.5 Da    PI: 9.6562
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC003711.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-102376155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
           HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                  rr+  +++E++RR+r+++ ++ L +llP+ +   +++   s  +   +A++YIk L+
  EcC003711.10 23 RRTERKIIEKNRRNRMKHLYSVLNSLLPSqP---SAQEaKSLPDQIDEAIRYIKGLE 76
                  79999************************55...344446777***********985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.77E-62080No hitNo description
SuperFamilySSF474599.81E-112194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.7062275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.1E-102392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-72376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-52881IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MALSLLNAIG KEMERGRQPS SPRRTERKII EKNRRNRMKH LYSVLNSLLP SQPSAQEAKS  60
LPDQIDEAIR YIKGLETAVK EAKDKKENLM GKKRPSPSTS SDTLAAITSP KIEIRVRDSS  120
LEVTLTSGLH DQFIFSEILR ILHEEKVEVL NVNFSVVGNS VYHLVHAKIG ESALGAAMIS  180
QRLKTFVYGA ATDGGHEEFH PNLWDCGLSS NIWNF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038678.11e-132PREDICTED: transcription factor bHLH99-like
TrEMBLA0A058ZZB71e-156A0A058ZZB7_EUCGR; Uncharacterized protein
STRINGGLYMA12G12880.12e-57(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM12782592
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-29bHLH family protein